BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017E12LP1|AL427180
(1039 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 2007 0.0
3x_Contig1745 123 7e-28
>3x_Contig1806
Length = 53694
Score = 2007 bits (1012), Expect = 0.0
Identities = 1034/1040 (99%), Gaps = 2/1040 (0%)
Strand = Plus / Plus
Query: 1 gatcatgactactaccatgactataaccctggatgagcttgcactcgaaaatcctgctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48544 gatcatgactactaccatgactataaccctggatgagcttgcactcgaaaatcctgctga 48603
Query: 61 gcatgttaaaaacattaaactaacaatgagatccaacttttaacgcgaaattgtacactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48604 gcatgttaaaaacattaaactaacaatgagatccaacttttaacgcgaaattgtacactc 48663
Query: 121 tcagtaattactggtcacaaccaaaggtatgtactatgttccttttctccagatctgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48664 tcagtaattactggtcacaaccaaaggtatgtactatgttccttttctccagatctgcca 48723
Query: 181 tcctcctctattcattattcacacttaaacaatatctctcgataaagaaagccatgtagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48724 tcctcctctattcattattcacacttaaacaatatctctcgataaagaaagccatgtagt 48783
Query: 241 caaattacgaaagaaccatttcctatttctcttagatcacggtaaactttctttggacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48784 caaattacgaaagaaccatttcctatttctcttagatcacggtaaactttctttggacag 48843
Query: 301 ggggtgtcatagcatcacttacaggtatcgtaaagattacttgcaaccaaattcttgccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48844 ggggtgtcatagcatcacttacaggtatcgtaaagattacttgcaaccaaattcttgccg 48903
Query: 361 aattttctccagatagtgaagtggcttcagccacttcaaggtaccttgataggcacccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48904 aattttctccagatagtgaagtggcttcagccacttcaaggtaccttgataggcacccaa 48963
Query: 421 gttggagttgttgctcgaagccagtgttcaactttttcgcaggaattacttccacagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48964 gttggagttgttgctcgaagccagtgttcaactttttcgcaggaattacttccacagaaa 49023
Query: 481 actatgtactactaagctgaaagcttgcataacggttgatatttctattttccgttgcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49024 actatgtactactaagctgaaagcttgcataacggttgatatttctattttccgttgcta 49083
Query: 541 attattgcggggaaaactgcaactgacattagtgagtacttttagtttttcctgtttaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49084 attattgcggggaaaactgcaactgacattagtgagtacttttagtttttcctgtttaag 49143
Query: 601 tttttttcgaacaaaagaatataaggtttgttttctgcagccattgttttccctgcttct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49144 tttttttcgaacaaaagaatataaggtttgttttctgcagccattgttttccctgcttct 49203
Query: 661 attgcagtgacgtagaagaaaacgcaggnnangcgggtgattaccccaggtaatttaaac 720
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 49204 attgcagtgacgtagaagaaaacgcagtgga-gcgggtgattaccccaggtaatttaaac 49262
Query: 721 ataacacagaaaagtgaatcagttatatatgcagtaatgttttgtgcttctatggaaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49263 ataacacagaaaagtgaatcagttatatatgcagtaatgttttgtgcttctatggaaaca 49322
Query: 781 accgagcgagaaaacacaagaatgttgaacataatgggtgaatgagttggctttgtccct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49323 accgagcgagaaaacacaagaatgttgaacataatgggtgaatgagttggctttgtccct 49382
Query: 841 gttcttaaggtcatactggggtaacattgaactgaactggaaaacactttgaataaatta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49383 gttcttaaggtcatactggggtaacattgaactgaactggaaaacactttgaataaatta 49442
Query: 901 gtgttacaccagtgaacggatatattgtttggattcggagatatcttccccaaatttagt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49443 gtgttacaccagtgaacggatatattgtttggattcggagatatcttccccaaatttagt 49502
Query: 961 ttaaagtttcccaacaggcgcggacggacaatataatttacaagcattatttgcc-atga 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 49503 ttaaagtttcccaacaggcgcggacggacaatataatttacaagcattatttgccaatga 49562
Query: 1020 ttttattttgtggggraaga 1039
||||||||||||||| ||||
Sbjct: 49563 ttttattttgtggggaaaga 49582
>3x_Contig1745
Length = 19830
Score = 123 bits (62), Expect = 7e-28
Identities = 104/118 (88%)
Strand = Plus / Minus
Query: 740 cagttatatatgcagtaatgttttgtgcttctatggaaacaaccgagcgagaaaacacaa 799
||||||||||| ||| ||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 2600 cagttatatatatagttatgattcgtgcttctatggaaacaaccgagcgagaacacacaa 2541
Query: 800 gaatgttgaacataatgggtgaatgagttggctttgtccctgttcttaaggtcatact 857
||||||||||||| ||||| |||||| ||||||||| | ||||||| ||||| ||||
Sbjct: 2540 gaatgttgaacatgatgggctaatgagctggctttgtacttgttcttgaggtcctact 2483
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7642
Number of Sequences: 1807
Number of extensions: 7642
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 2
length of query: 1039
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1023
effective length of database: 10,329,639
effective search space: 10567220697
effective search space used: 10567220697
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)